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  5. TP05G00300.1

TP05G00300.1


Description : ABC transporter-like; ABC transporter type 1, transmembrane domain [Interproscan].


Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP05G00300.1
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000293.10 tig00000572_g2208.t1 Solute transport.primary active transport.ABC... 0.01 OrthoFinder
Cpa|evm.model.tig00020961.3 tig00020961_g16623.t1 ABC transporter B family member 25 OS=Oryza sativa... 0.02 OrthoFinder
Cre16.g669525 30777112 ABC transporter B family member 28 OS=Arabidopsis thaliana 0.02 OrthoFinder
EOD14122 No alias Putative ABC transporter [Ensembl]. 0.02 OrthoFinder
Sro1567_g282990.1 Contig3738.g28665 Leptomycin B resistance protein pmd1 0.02 OrthoFinder
Sro232_g093950.1 Contig4063.g31160 Leptomycin B resistance protein pmd1 0.02 OrthoFinder
SymbC1.scaffold4.676 4.676 Acetyl-coenzyme A synthetase, N-terminal domain;... 0.01 OrthoFinder
Transcript_contig_2557 2557 Hypothetical protein 0.02 OrthoFinder
Transcript_contig_54804 54804 ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005342 organic acid transmembrane transporter activity IEP Enrichment
CC GO:0005887 integral component of plasma membrane IEP Enrichment
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
MF GO:0015129 lactate transmembrane transporter activity IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015718 monocarboxylic acid transport IEP Enrichment
BP GO:0015727 lactate transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
BP GO:0015850 organic hydroxy compound transport IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Enrichment
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 467 633
IPR003439 ABC_transporter-like_ATP-bd 774 922
IPR011527 ABC1_TM_dom 1119 1350
IPR011527 ABC1_TM_dom 59 297
No external refs found!