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  5. TP04G09070.1

TP04G09070.1


Description : Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase [Interproscan].


Gene families : OG_01_0003394 (OrthoFinder) Phylogenetic Tree(s): OG0003394_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: TP04G09070.1
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Cre07.g342150 30774890, HEM1 Coenzyme metabolism.tetrapyrrol... 0.12 OrthoFinder
Cz03g02090.t1 No alias Tetrapyrrole biosynthesis, glutamyl-tRNA reductase,... 0.04 OrthoFinder
Dusal.0002s00012.1 33188005 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA... 0.03 OrthoFinder
OT_11G00700.1 No alias Tetrapyrrole biosynthesis, glutamyl-tRNA reductase,... 0.05 OrthoFinder
PTI_02G05810.1 No alias Tetrapyrrole biosynthesis, glutamyl-tRNA reductase,... 0.12 OrthoFinder
Sro361_g126400.1 Contig1094.g10565 Glutamyl-tRNA reductase 0.16 OrthoFinder
Transcript_contig_53881 53881 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase,... 0.01 OrthoFinder
Vocar.0067s0036.1 32884125 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase,... 0.03 OrthoFinder
XM_002509293.1 MICPUN_62986, 62986 Glutamyl-tRNA reductase (HEMA) 0.07 OrthoFinder
XM_003061374.1 MicpuC2_48234, 48234 Glutamyl-tRNA reductase chloroplast precursor (HEMA) 0.04 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60735.1_4789 PRW60735 Glutamyl-trna reductase 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008883 glutamyl-tRNA reductase activity IEA Interproscan
BP GO:0033014 tetrapyrrole biosynthetic process IEA Interproscan
MF GO:0050661 NADP binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
MF GO:0004418 hydroxymethylbilane synthase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004655 porphobilinogen synthase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Enrichment
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Enrichment
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Enrichment
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR006151 Shikm_DH/Glu-tRNA_Rdtase 223 351
IPR015896 4pyrrol_synth_GluRdtase_dimer 365 467
IPR015895 4pyrrol_synth_GluRdtase_N 43 194
No external refs found!