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  5. Cpa|evm.model.tig00000042.30

Cpa|evm.model.tig00000042.30 (tig00000042_g15422.t1)


Aliases : tig00000042_g15422.t1

Description : Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.RFC2 component


Gene families : OG_01_0003051 (OrthoFinder) Phylogenetic Tree(s): OG0003051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000042.30
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
Cre07.g337150 30774314, RFC2 Cell cycle.interphase.DNA... 0.04 OrthoFinder
Cz07g06250.t1 No alias ATPase, AAA-type, core; Replication factor C, C-terminal... 0.02 OrthoFinder
EOD09339 No alias Putative replication factor C subunit 2 [Ensembl]. 0.03 OrthoFinder
Sro730_g194110.1 Contig80.g843 Factor C subunit 2 0.04 OrthoFinder
Vocar.0023s0214.1 32883403 ATPase, AAA-type, core; Replication factor C, C-terminal... 0.02 OrthoFinder
XM_002507437.1 MICPUN_54938, 54938 Replication factor c, subunit 2 (RFC2) 0.05 OrthoFinder
lcl|BLLF01001259.1_cds_GFH18182.1_12659 HaLaN_14938, GFH18182 DNA replication factor C complex subunit 2 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003352 regulation of cilium movement IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0032879 regulation of localization IEP Enrichment
BP GO:0032886 regulation of microtubule-based process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0051270 regulation of cellular component movement IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0060632 regulation of microtubule-based movement IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 62 179
IPR013748 Rep_factorC_C 247 331
No external refs found!