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  5. TP03G08510.1

TP03G08510.1


Description : Ribulose-phosphate 3-epimerase-like [Interproscan].


Gene families : OG_01_0000691 (OrthoFinder) Phylogenetic Tree(s): OG0000691_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP03G08510.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020564.39 tig00020564_g11439.t1 Ribulose-phosphate 3-epimerase, chloroplastic... 0.07 OrthoFinder
EOD06320 No alias Ribulose-5-phosphate 3-epimerase [Ensembl]. 0.07 OrthoFinder
EOD07690 No alias Ribulose-phosphate 3-epimerase-like [Interproscan]. 0.07 OrthoFinder
OT_06G01640.1 No alias Ribulose-phosphate 3-epimerase-like [Interproscan]. 0.06 OrthoFinder
PTI_01G00840.1 No alias Ribulose-phosphate 3-epimerase-like [Interproscan]. 0.14 OrthoFinder
Sro1081_g239100.1 Contig4556.g34028 Ribulose-phosphate 3-epimerase 0.11 OrthoFinder
Transcript_contig_55201 55201 Ribulose-phosphate 3-epimerase-like [Interproscan]. 0.03 OrthoFinder
XM_002500789.1 MICPUN_104768, 104768 Ribulose-phosphate 3-epimerase (RPE) 0.06 OrthoFinder
XM_003059373.1 MicpuC2_47473, 47473 Ribulose-phosphate 3-epimerase-like [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000166.1_cds_GFH08518.1_2995 HaLaN_03495, GFH08518 Ribulose-phosphate 3-epimerase 0.01 OrthoFinder
lcl|BLLF01000166.1_cds_GFH08523.1_3000 HaLaN_03502, GFH08523 Ribulose-phosphate 3-epimerase 0.03 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56800.1_9618 PRW56800 Ribulose-phosphate 3-chloroplastic 0.06 OrthoFinder
lcl|VRMN01000015.1_cds_KAA8491266.1_5894 KAA8491266 Ribulose-phosphate 3-epimerase, chloroplastic 0.03 OrthoFinder
lcl|VRMN01000017.1_cds_KAA8490989.1_6192 KAA8490989 Ribulose-phosphate 3-epimerase, chloroplastic 0.04 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004655 porphobilinogen synthase activity IEP Enrichment
MF GO:0004779 sulfate adenylyltransferase activity IEP Enrichment
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Enrichment
MF GO:0015252 proton channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015693 magnesium ion transport IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Enrichment
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000056 Ribul_P_3_epim-like 2 178
No external refs found!