Description : Ribosomal protein L13 [Interproscan].
Gene families : OG_01_0000958 (OrthoFinder) Phylogenetic Tree(s): OG0000958_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: TP03G01700.1 | |
Cluster | HCCA: Cluster_57 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00020912.24 | tig00020912_g15798.t1 | 50S ribosomal protein L13, chloroplastic OS=Arabidopsis thaliana | 0.01 | OrthoFinder | |
Transcript_contig_3807 | 3807 | Ribosomal protein L13 [Interproscan]. | 0.01 | OrthoFinder | |
Vocar.0062s0012.1 | 32892907 | Ribosomal protein L13 [Interproscan]. | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | Enrichment |
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Enrichment |
CC | GO:0005741 | mitochondrial outer membrane | IEP | Enrichment |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Enrichment |
BP | GO:0006457 | protein folding | IEP | Enrichment |
BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | Enrichment |
BP | GO:0006790 | sulfur compound metabolic process | IEP | Enrichment |
CC | GO:0016272 | prefoldin complex | IEP | Enrichment |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Enrichment |
CC | GO:0019867 | outer membrane | IEP | Enrichment |
CC | GO:0031090 | organelle membrane | IEP | Enrichment |
CC | GO:0031966 | mitochondrial membrane | IEP | Enrichment |
CC | GO:0031968 | organelle outer membrane | IEP | Enrichment |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Enrichment |
BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | Enrichment |
MF | GO:0051082 | unfolded protein binding | IEP | Enrichment |
CC | GO:0098588 | bounding membrane of organelle | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005822 | Ribosomal_L13 | 12 | 135 |
No external refs found! |