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Description : Uncharacterised domain NUC173 [Interproscan].
Gene families : OG_01_0002874 (OrthoFinder) Phylogenetic Tree(s): OG0002874_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: TP03G00440.1 | |
| Cluster | HCCA: Cluster_9 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00020554.42 | tig00020554_g10824.t1 | No description available | 0.02 | OrthoFinder | |
| Cre19.g751197 | 30778316 | No description available | 0.08 | OrthoFinder | |
| Cz04g06250.t1 | No alias | Uncharacterised domain NUC173 [Interproscan]. | 0.09 | OrthoFinder | |
| EOD33147 | No alias | Uncharacterised domain NUC173 [Interproscan]. | 0.04 | OrthoFinder | |
| OT_15G01680.1 | No alias | Uncharacterised domain NUC173 [Interproscan]. | 0.05 | OrthoFinder | |
| PTI_01G02060.1 | No alias | Uncharacterised domain NUC173 [Interproscan]. | 0.09 | OrthoFinder | |
| Sro536_g162240.1 | Contig299.g3954 | RRP12-like protein | 0.1 | OrthoFinder | |
| Transcript_contig_55853 | 55853 | Uncharacterised domain NUC173 [Interproscan]. | 0.05 | OrthoFinder | |
| Vocar.0006s0029.1 | 32894231 | Uncharacterised domain NUC173 [Interproscan]. | 0.02 | OrthoFinder | |
| XM_002504930.1 | MICPUN_62622, 62622 | Uncharacterised domain NUC173 [Interproscan]. | 0.07 | OrthoFinder | |
| XM_003060590.1 | MicpuC2_40902, 40902 | Uncharacterised domain NUC173 [Interproscan]. | 0.08 | OrthoFinder | |
| lcl|LHPG02000002.1_cds_PRW60392.1_4606 | PRW60392 | ARM repeat superfamily | 0.08 | OrthoFinder | |
| lcl|VRMN01000001.1_cds_KAA8497894.1_6847 | KAA8497894 | Putative ribosomal RNA-processing protein 12 | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003743 | translation initiation factor activity | IEP | Enrichment |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
| MF | GO:0004540 | ribonuclease activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| CC | GO:0005730 | nucleolus | IEP | Enrichment |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Enrichment |
| BP | GO:0006099 | tricarboxylic acid cycle | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006397 | mRNA processing | IEP | Enrichment |
| BP | GO:0006413 | translational initiation | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016071 | mRNA metabolic process | IEP | Enrichment |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| MF | GO:0031369 | translation initiation factor binding | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
| MF | GO:0097747 | RNA polymerase activity | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR012978 | Uncharacterised_NUC173 | 609 | 865 |
| No external refs found! |