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  5. TP02G01130.1

TP02G01130.1


Description : Zinc finger, RING-type [Interproscan].


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP02G01130.1
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
PTI_23G01280.1 No alias Zinc finger, RING-type [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold510.4 510.4 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold809.9 809.9 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
Transcript_contig_1388 1388 Hypothetical protein 0.02 OrthoFinder
Vocar.0011s0053.1 32895230 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
XM_002503238.1 MICPUN_101076, 101076 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
XM_002505622.1 MICPUN_109335, 109335 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
XM_003062145.1 MicpuC2_9885, 9885 Zinc finger, RING-type [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01000780.1_cds_GFH14902.1_9379 HaLaN_11039, GFH14902 RING-type domain-containing protein 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498945.1_7898 KAA8498945 E3 ubiquitin-protein ligase 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496988.1_717 KAA8496988 E3 ubiquitin-protein ligase 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495598.1_1596 KAA8495598 E3 ubiquitin-protein ligase 0.01 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495830.1_1828 KAA8495830 Putative E3 ubiquitin-protein ligase RHC1A 0.03 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494124.1_3988 KAA8494124 E3 ubiquitin-protein ligase ATL9 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 272 314
No external refs found!