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  5. TP01G10480.1

TP01G10480.1


Description : Chromosome segregation protein Spc25 [Interproscan].


Gene families : OG_01_0003864 (OrthoFinder) Phylogenetic Tree(s): OG0003864_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP01G10480.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020684.34 tig00020684_g12883.t1 Cell cycle.mitosis and meiosis.chromosome... 0.03 OrthoFinder
Cre16.g658600 30778049 Cell cycle.mitosis and meiosis.chromosome... 0.03 OrthoFinder
PTI_05G01990.1 No alias Chromosome segregation protein Spc25 [Interproscan]. 0.05 OrthoFinder
Sro4_g002990.1 Contig3815.g29217 Kinetochore protein Spc25 0.07 OrthoFinder
Transcript_contig_6419 6419 Hypothetical protein 0.01 OrthoFinder
lcl|BLLF01000140.1_cds_GFH08131.1_2608 HaLaN_03046, GFH08131 Kinetochore protein spc25 0.02 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492503.1_9196 KAA8492503 Kinetochore protein Spc25 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Enrichment
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003714 transcription corepressor activity IEP Enrichment
MF GO:0003779 actin binding IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008156 negative regulation of DNA replication IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016125 sterol metabolic process IEP Enrichment
BP GO:0016126 sterol biosynthetic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019207 kinase regulator activity IEP Enrichment
MF GO:0019887 protein kinase regulator activity IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0045005 DNA-dependent DNA replication maintenance of fidelity IEP Enrichment
BP GO:0048478 replication fork protection IEP Enrichment
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0090329 regulation of DNA-dependent DNA replication IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR013255 Spc25_C 177 245
No external refs found!