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Description : PPPDE putative peptidase domain [Interproscan].
Gene families : OG_01_0000405 (OrthoFinder) Phylogenetic Tree(s): OG0000405_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: TP01G06290.1 | |
| Cluster | HCCA: Cluster_74 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000213 | tRNA-intron endonuclease activity | IEP | Enrichment |
| BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | Enrichment |
| CC | GO:0000439 | transcription factor TFIIH core complex | IEP | Enrichment |
| BP | GO:0002097 | tRNA wobble base modification | IEP | Enrichment |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | Enrichment |
| MF | GO:0004519 | endonuclease activity | IEP | Enrichment |
| MF | GO:0004521 | endoribonuclease activity | IEP | Enrichment |
| MF | GO:0004540 | ribonuclease activity | IEP | Enrichment |
| MF | GO:0004549 | tRNA-specific ribonuclease activity | IEP | Enrichment |
| CC | GO:0005667 | transcription regulator complex | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006289 | nucleotide-excision repair | IEP | Enrichment |
| BP | GO:0006364 | rRNA processing | IEP | Enrichment |
| BP | GO:0006383 | transcription by RNA polymerase III | IEP | Enrichment |
| BP | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0008033 | tRNA processing | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| BP | GO:0009451 | RNA modification | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | Enrichment |
| MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | Enrichment |
| CC | GO:0033588 | elongator holoenzyme complex | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0051726 | regulation of cell cycle | IEP | Enrichment |
| CC | GO:0072546 | EMC complex | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | Enrichment |
| CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR008580 | PPPDE_dom | 3 | 140 |
| No external refs found! |