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  5. Sro982_g227680.1

Sro982_g227680.1 (Contig2831.g22679)


Aliases : Contig2831.g22679

Description : Probable 2-carboxy-D-arabinitol-1-phosphatase


Gene families : OG_01_0000956 (OrthoFinder) Phylogenetic Tree(s): OG0000956_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro982_g227680.1
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000140.4 tig00000140_g8461.t1 Probable 2-carboxy-D-arabinitol-1-phosphatase... 0.01 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496907.1_636 KAA8496907 Putative 2-carboxy-D-arabinitol-1-phosphatase 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR013078 His_Pase_superF_clade-1 32 232
No external refs found!