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  5. Sro946_g223220.1

Sro946_g223220.1 (Contig2147.g18082)


Aliases : Contig2147.g18082

Description : LAS seventeen-binding protein 3


Gene families : OG_01_0001026 (OrthoFinder) Phylogenetic Tree(s): OG0001026_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro946_g223220.1
Cluster HCCA: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
TP03G01480.1 No alias FYVE zinc finger; Ysc84 actin-binding domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
InterPro domains Description Start Stop
IPR000306 Znf_FYVE 75 213
IPR007461 Ysc84_actin-binding 365 490
No external refs found!