Sro798_g203950.1 (Contig2431.g19900)


Aliases : Contig2431.g19900

Description : Hemolysin-type calcium-binding repeat (2 copies)


Gene families : OG_01_0006171 (OrthoFinder) Phylogenetic Tree(s): OG0006171_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro798_g203950.1
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Sro1938_g306540.1 Contig3016.g24077 Hemolysin-type calcium-binding repeat (2 copies) 0.04 OrthoFinder
Sro3157_g344570.1 Contig789.g8804 Hemolysin-type calcium-binding 0.04 OrthoFinder
Sro947_g223350.1 Contig4683.g34819 Hemolysin-type calcium-binding repeat (2 copies) 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
CC GO:0000145 exocyst IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR007280 Peptidase_C_arc/bac 69 142
No external refs found!