1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro792_g203130.1

Sro792_g203130.1 (Contig385.g5181)


Aliases : Contig385.g5181

Description : Protein kinase 4 (Fragment)


Gene families : OG_01_0000033 (OrthoFinder) Phylogenetic Tree(s): OG0000033_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro792_g203130.1
Cluster HCCA: Cluster_282

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000037.32 tig00000037_g10101.t1 Enzyme classification.EC_2 transferases.EC_2.7... 0.02 OrthoFinder
Cpa|evm.model.tig00000718.70 tig00000718_g3742.t1 Protein modification.phosphorylation.AGC kinase... 0.02 OrthoFinder
PTI_03G04280.1 No alias Protein kinase domain [Interproscan]. 0.02 OrthoFinder
Sro33_g021590.1 Contig2613.g21180 MAP kinase-activated protein kinase 2 (Fragment) 0.04 OrthoFinder
TP04G04240.1 No alias Protein kinase domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_2165 2165 Hypothetical protein 0.01 OrthoFinder
XM_002505062.1 MICPUN_69531, 69531 Protein kinase domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
CC GO:0008303 caspase complex IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016255 attachment of GPI anchor to protein IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
CC GO:0042765 GPI-anchor transamidase complex IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 379 460
IPR000595 cNMP-bd_dom 252 336
IPR000595 cNMP-bd_dom 135 215
IPR000719 Prot_kinase_dom 487 745
No external refs found!