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  5. Cpa|evm.model.tig00000237.33

Cpa|evm.model.tig00000237.33 (tig00000237_g20482.t1)


Aliases : tig00000237_g20482.t1

Description : Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB4 import karyopherin


Gene families : OG_01_0000711 (OrthoFinder) Phylogenetic Tree(s): OG0000711_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000237.33
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Cre12.g490850 30791907 Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder
EOD25312 No alias Importin-beta, N-terminal domain [Interproscan]. 0.03 OrthoFinder
EOD38465 No alias Importin-beta, N-terminal domain; Importin repeat 4;... 0.04 OrthoFinder
OT_13G02820.1 No alias HEAT-like repeat [Interproscan]. 0.03 OrthoFinder
OT_18G01010.1 No alias Importin repeat 4; HEAT repeats [Interproscan]. 0.01 OrthoFinder
PTI_25G00850.1 No alias Vacuole morphology and inheritance protein 14,... 0.04 OrthoFinder
Sro15_g011250.1 Contig791.g8851 Importin subunit beta-4 0.03 OrthoFinder
Sro764_g198990.1 Contig1534.g13928 Importin 0.02 OrthoFinder
Vocar.0022s0092.1 32891873 HEAT repeat; Importin repeat 4 [Interproscan]. 0.02 OrthoFinder
Vocar.0052s0003.1 32897677 Hypothetical protein 0.02 OrthoFinder
XM_002500637.1 MICPUN_80369, 80369 Importin repeat 4; HEAT repeats [Interproscan]. 0.02 OrthoFinder
XM_002506661.1 MICPUN_64789, 64789 HEAT-like repeat; Importin-beta, N-terminal domain... 0.03 OrthoFinder
lcl|BLLF01000369.1_cds_GFH11050.1_5527 HaLaN_06482, GFH11050 Importin N-terminal domain-containing protein 0.01 OrthoFinder
lcl|BLLF01001155.1_cds_GFH17486.1_11963 HaLaN_14135, GFH17486 Importin N-terminal domain-containing protein 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499564.1_8517 KAA8499564 Importin-5 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
BP GO:0000959 mitochondrial RNA metabolic process IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR001494 Importin-beta_N 29 94
No external refs found!