Sro72_g039840.1 (Contig1459.g13383)

Aliases : Contig1459.g13383

Description : 36 and H4 lysine-20 specific

Gene families : OG_01_0000051 (OrthoFinder) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro72_g039840.1
Cluster	HCCA: Cluster_164

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00020710.90	tig00020710_g13355.t1	No description available	0.02	OrthoFinder
Cre03.g197700	30788134	Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa...	0.02	OrthoFinder
Cre17.g732901	30782342	No description available	0.02	OrthoFinder
Cre17.g746247	30782096	Chromatin organisation.histone modifications.histone...	0.03	OrthoFinder
Cz02g12250.t1	No alias	SET domain; PHD-like zinc-binding domain; SAND domain...	0.02	OrthoFinder
Cz02g21310.t1	No alias	PWWP domain; PHD-finger; FY-rich, N-terminal; FY-rich,...	0.02	OrthoFinder
Cz07g29070.t1	No alias	AWS domain; SET domain; Zinc finger, GATA-type [Interproscan].	0.04	OrthoFinder
Dusal.1340s00001.1	33194068	SET domain; AWS domain [Interproscan].	0.01	OrthoFinder
OT_13G03070.1	No alias	AWS domain; SET domain [Interproscan].	0.02	OrthoFinder
PTI_01G03700.1	No alias	SET domain; Zinc finger, PHD-finger; Bromodomain [Interproscan].	0.03	OrthoFinder
PTI_01G11780.1	No alias	SET domain; AWS domain [Interproscan].	0.06	OrthoFinder
PTI_22G01600.1	No alias	SET domain; PWWP domain; Zinc finger, PHD-finger;...	0.03	OrthoFinder
PTI_29G00470.1	No alias	Protein kinase domain; SET domain; Cyclin, N-terminal...	0.02	OrthoFinder
Transcript_contig_54729	54729	SET domain; Pre-SET CXC domain [Interproscan].	0.01	OrthoFinder
Transcript_contig_78818	78818	PHD-finger; SAND domain; PHD-zinc-finger like domain...	0.01	OrthoFinder
Vocar.0011s0318.1	32895428	FY-rich, C-terminal; PHD-zinc-finger like domain; PWWP...	0.02	OrthoFinder
Vocar.0044s0031.1	32896567	Zinc finger, CW-type; SET domain; AWS domain [Interproscan].	0.02	OrthoFinder
XM_002502643.1	MICPUN_58938, 58938	Set domain protein	0.02	OrthoFinder
XM_003062387.1	MicpuC2_68746, 68746	Hypothetical protein	0.02	OrthoFinder
XM_003062388.1	MicpuC2_21435, 21435	Set domain protein	0.02	OrthoFinder
XM_003064447.1	MicpuC2_54214, 54214	Set domain protein	0.02	OrthoFinder
XM_003064448.1	MicpuC2_54215, 54215	Hypothetical protein	0.01	OrthoFinder
lcl\|BLLF01002303.1_cds_GFH23571.1_18048	HaLaN_21200, GFH23571	Hypothetical protein	0.02	OrthoFinder
lcl\|BLLF01002303.1_cds_GFH23572.1_18049	HaLaN_21201, GFH23572	Histone-lysine N-methyltransferase	0.03	OrthoFinder
lcl\|LHPG02000002.1_cds_PRW60593.1_4707	PRW60593	Histone-lysine N-methyltransferase ASHH2	0.02	OrthoFinder
lcl\|LHPG02000007.1_cds_PRW57331.1_9054	PRW57331	Microtubule-associated futsch isoform X1	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Enrichment
MF	GO:0003678	DNA helicase activity	IEP	Enrichment
MF	GO:0003774	motor activity	IEP	Enrichment
MF	GO:0003777	microtubule motor activity	IEP	Enrichment
MF	GO:0004386	helicase activity	IEP	Enrichment
MF	GO:0004512	inositol-3-phosphate synthase activity	IEP	Enrichment
MF	GO:0005524	ATP binding	IEP	Enrichment
CC	GO:0005783	endoplasmic reticulum	IEP	Enrichment
BP	GO:0006020	inositol metabolic process	IEP	Enrichment
BP	GO:0006021	inositol biosynthetic process	IEP	Enrichment
BP	GO:0006066	alcohol metabolic process	IEP	Enrichment
BP	GO:0006351	transcription, DNA-templated	IEP	Enrichment
BP	GO:0006605	protein targeting	IEP	Enrichment
BP	GO:0006644	phospholipid metabolic process	IEP	Enrichment
BP	GO:0006810	transport	IEP	Enrichment
BP	GO:0006886	intracellular protein transport	IEP	Enrichment
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	Enrichment
BP	GO:0006928	movement of cell or subcellular component	IEP	Enrichment
BP	GO:0007017	microtubule-based process	IEP	Enrichment
BP	GO:0007018	microtubule-based movement	IEP	Enrichment
MF	GO:0008017	microtubule binding	IEP	Enrichment
MF	GO:0008092	cytoskeletal protein binding	IEP	Enrichment
MF	GO:0008094	ATPase, acting on DNA	IEP	Enrichment
BP	GO:0008104	protein localization	IEP	Enrichment
BP	GO:0008654	phospholipid biosynthetic process	IEP	Enrichment
BP	GO:0009987	cellular process	IEP	Enrichment
BP	GO:0015031	protein transport	IEP	Enrichment
MF	GO:0015631	tubulin binding	IEP	Enrichment
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Enrichment
BP	GO:0016192	vesicle-mediated transport	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0016872	intramolecular lyase activity	IEP	Enrichment
MF	GO:0017076	purine nucleotide binding	IEP	Enrichment
CC	GO:0017119	Golgi transport complex	IEP	Enrichment
BP	GO:0019751	polyol metabolic process	IEP	Enrichment
CC	GO:0030117	membrane coat	IEP	Enrichment
CC	GO:0030119	AP-type membrane coat adaptor complex	IEP	Enrichment
CC	GO:0030131	clathrin adaptor complex	IEP	Enrichment
MF	GO:0030554	adenyl nucleotide binding	IEP	Enrichment
MF	GO:0032553	ribonucleotide binding	IEP	Enrichment
MF	GO:0032555	purine ribonucleotide binding	IEP	Enrichment
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Enrichment
BP	GO:0033036	macromolecule localization	IEP	Enrichment
BP	GO:0033365	protein localization to organelle	IEP	Enrichment
BP	GO:0034613	cellular protein localization	IEP	Enrichment
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Enrichment
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Enrichment
MF	GO:0036094	small molecule binding	IEP	Enrichment
MF	GO:0043167	ion binding	IEP	Enrichment
MF	GO:0043168	anion binding	IEP	Enrichment
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Enrichment
BP	GO:0045047	protein targeting to ER	IEP	Enrichment
BP	GO:0045184	establishment of protein localization	IEP	Enrichment
BP	GO:0046165	alcohol biosynthetic process	IEP	Enrichment
BP	GO:0046173	polyol biosynthetic process	IEP	Enrichment
BP	GO:0046907	intracellular transport	IEP	Enrichment
BP	GO:0048193	Golgi vesicle transport	IEP	Enrichment
BP	GO:0051179	localization	IEP	Enrichment
BP	GO:0051234	establishment of localization	IEP	Enrichment
BP	GO:0051641	cellular localization	IEP	Enrichment
BP	GO:0051649	establishment of localization in cell	IEP	Enrichment
BP	GO:0070727	cellular macromolecule localization	IEP	Enrichment
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	Enrichment
BP	GO:0071702	organic substance transport	IEP	Enrichment
BP	GO:0071705	nitrogen compound transport	IEP	Enrichment
BP	GO:0072594	establishment of protein localization to organelle	IEP	Enrichment
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	Enrichment
MF	GO:0097367	carbohydrate derivative binding	IEP	Enrichment
BP	GO:0097659	nucleic acid-templated transcription	IEP	Enrichment
CC	GO:0099023	vesicle tethering complex	IEP	Enrichment
MF	GO:1901265	nucleoside phosphate binding	IEP	Enrichment
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	Enrichment
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	33	139
IPR001214	SET_dom	1283	1387
IPR041355	Pre-SET_CXC	1214	1245

External Links

No external refs found!

Sro72_g039840.1 (Contig1459.g13383)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation