1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro721_g192740.1

Sro721_g192740.1 (Contig2526.g20635)


Aliases : Contig2526.g20635

Description : Base biosynthesis protein 2b


Gene families : OG_01_0003714 (OrthoFinder) Phylogenetic Tree(s): OG0003714_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro721_g192740.1
Cluster HCCA: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000025.27 tig00000025_g7936.t1 Lipid metabolism.sphingolipid metabolism.serine... 0.02 OrthoFinder
Cre04.g230144 30791336, SPT1 Lipid metabolism.sphingolipid metabolism.serine... 0.03 OrthoFinder
Cz12g19240.t1 No alias Aminotransferase, class I/classII [Interproscan]. 0.01 OrthoFinder
EOD09569 No alias Serine palmitoyltransferase [Ensembl]. 0.03 OrthoFinder
PTI_03G01620.1 No alias Aminotransferase, class I/classII [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01001330.1_cds_GFH18625.1_13102 HaLaN_15460, GFH18625 Aminotran_1_2 domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0005375 copper ion transmembrane transporter activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006825 copper ion transport IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
BP GO:0016540 protein autoprocessing IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0035434 copper ion transmembrane transport IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR004839 Aminotransferase_I/II 240 599
No external refs found!