Sro62_g035340.1 (Contig2718.g21915)


Aliases : Contig2718.g21915

Description : Ionotropic glutamate receptor [Interproscan].


Gene families : OG_01_0000795 (OrthoFinder) Phylogenetic Tree(s): OG0000795_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro62_g035340.1
Cluster HCCA: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
Sro1777_g296910.1 Contig3318.g26032 Receptor subunit 1 0.03 OrthoFinder
Sro1777_g296940.1 Contig3318.g26035 Receptor ionotropic, NMDA 1 0.04 OrthoFinder
Sro1834_g300540.1 Contig890.g9473 Receptor subunit 1 0.03 OrthoFinder
Sro206_g086490.1 Contig4750.g35186 Ionotropic glutamate receptor [Interproscan]. 0.05 OrthoFinder
Sro2900_g339760.1 Contig1521.g13881 Receptor subunit 1 0.02 OrthoFinder
Sro468_g149250.1 Contig3973.g30519 Hypothetical protein 0.03 OrthoFinder
Sro557_g166130.1 Contig1427.g13183 Receptor subunit 1 0.03 OrthoFinder
Sro833_g208600.1 Contig120.g1366 Receptor ionotropic, NMDA 1 0.03 OrthoFinder
Sro935_g222040.1 Contig1126.g10784 Receptor subunit 1 0.03 OrthoFinder
Sro949_g223700.1 Contig3294.g25870 Receptor ionotropic, delta-2 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004888 transmembrane signaling receptor activity IEP Enrichment
MF GO:0004930 G protein-coupled receptor activity IEP Enrichment
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
MF GO:0038023 signaling receptor activity IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
MF GO:0060089 molecular transducer activity IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt 199 526
No external refs found!