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  5. Sro61_g035150.1

Sro61_g035150.1 (Contig3112.g24768)


Aliases : Contig3112.g24768

Description : USP6 N-terminal-like protein


Gene families : OG_01_0000138 (OrthoFinder) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro61_g035150.1
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
Cre07.g315350 30774903 No description available 0.01 OrthoFinder
Cz04g00110.t1 No alias Rab-GTPase-TBC domain [Interproscan]. 0.02 OrthoFinder
Cz17g10040.t1 No alias Rab-GTPase-TBC domain [Interproscan]. 0.02 OrthoFinder
EOD11942 No alias Rab-GTPase-TBC domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_57083 57083 Rab-GTPase-TBC domain [Interproscan]. 0.02 OrthoFinder
Vocar.0030s0125.1 32894404 Rab-GTPase-TBC domain [Interproscan]. 0.02 OrthoFinder
Vocar.0072s0018.1 32898775 Rab-GTPase-TBC domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000340.1_cds_GFH10723.1_5200 HaLaN_06088, GFH10723 Rab-GAP TBC domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0004057 arginyltransferase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0010921 regulation of phosphatase activity IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
BP GO:0016598 protein arginylation IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
BP GO:0019220 regulation of phosphate metabolic process IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
CC GO:0030289 protein phosphatase 4 complex IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
BP GO:0031399 regulation of protein modification process IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0035303 regulation of dephosphorylation IEP Enrichment
BP GO:0035304 regulation of protein dephosphorylation IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0050790 regulation of catalytic activity IEP Enrichment
BP GO:0051174 regulation of phosphorus metabolic process IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051336 regulation of hydrolase activity IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
BP GO:0065009 regulation of molecular function IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 359 543
No external refs found!