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  5. Sro5_g004410.1

Sro5_g004410.1 (Contig4001.g30756)


Aliases : Contig4001.g30756

Description : Intercellular signal essential for a variety of patterning events during development (By similarity)


Gene families : OG_01_0000566 (OrthoFinder) Phylogenetic Tree(s): OG0000566_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro5_g004410.1
Cluster HCCA: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
Sro112_g055740.1 Contig1575.g14299 FG-GAP repeat 0.05 OrthoFinder
Sro16_g011740.1 Contig916.g9611 Ricin B, lectin domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment

No InterPro domains available for this sequence

No external refs found!