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  5. Sro589_g171680.1

Sro589_g171680.1 (Contig2898.g23105)


Aliases : Contig2898.g23105

Description : Cycle protein 20 homolog


Gene families : OG_01_0000709 (OrthoFinder) Phylogenetic Tree(s): OG0000709_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro589_g171680.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cre09.g399911 30780367, CDC20 Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.03 OrthoFinder
Cz14g18020.t1 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
Dusal.0396s00002.1 33198517 WD40 repeat; Anaphase-promoting complex subunit 4, WD40... 0.01 OrthoFinder
EOD34958 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
OT_04G04640.1 No alias WD40 repeat; Anaphase-promoting complex subunit 4, WD40... 0.02 OrthoFinder
Sro103_g052460.1 Contig308.g4043 Cofactor of APC complex 0.03 OrthoFinder
XM_002502541.1 MICPUN_97422, 97422 Anaphase promoting complex protein (CDC20) 0.02 OrthoFinder
lcl|BLLF01003044.1_cds_GFH26172.1_20649 HaLaN_24273, GFH26172 Cell division cycle protein 20 0.02 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32897.1_3759 PRW32897 WD40 repeat 0.02 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32950.1_3883 PRW32950 Cell division cycle 20 isoform B 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494868.1_3398 KAA8494868 Anaphase-promoting complex subunit cdc20 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
InterPro domains Description Start Stop
IPR013979 TIF_beta_prop-like 351 464
IPR024977 Apc4_WD40_dom 188 278
IPR001680 WD40_repeat 301 337
No external refs found!