Sro51_chlor_g030340.1 (Rpl12)


Aliases : Rpl12

Description : Rpl12


Gene families : OG_01_0000959 (OrthoFinder) Phylogenetic Tree(s): OG0000959_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro51_chlor_g030340.1
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Cre06.g293700 30779544, MRPL7 Protein biosynthesis.organelle translation... 0.03 OrthoFinder
Cre13.g581650 30784593, PRPL7 Protein biosynthesis.organelle translation... 0.1 OrthoFinder
Cz11g16290.t1 No alias Ribosomal protein L7/L12, C-terminal [Interproscan]. 0.01 OrthoFinder
CzCPg01440.t1 No alias Ribosomal protein L7/L12, oligomerisation; Ribosomal... 0.14 OrthoFinder
Dusal.0015s00043.1 33190941 Ribosomal protein L7/L12, C-terminal; Ribosomal protein... 0.02 OrthoFinder
EOD36893 No alias Ribosomal protein L7/L12, C-terminal; Ribosomal protein... 0.02 OrthoFinder
OT_04G04890.1 No alias Ribosomal protein L7/L12, C-terminal; Ribosomal protein... 0.09 OrthoFinder
Sro25_g017220.1 Contig1417.g13061 Protein L7/L12 0.04 OrthoFinder
Sro25_g017240.1 Contig1417.g13063 Protein L7/L12 0.03 OrthoFinder
TPCG00690.1 No alias Ribosomal protein L7/L12, oligomerisation; Ribosomal... 0.16 OrthoFinder
Vocar.0001s0073.1 32885974 Ribosomal protein L7/L12, oligomerisation; Ribosomal... 0.04 OrthoFinder
XM_002504795.1 MICPUN_98038, 98038 Ribosomal protein L7/L12, C-terminal; Ribosomal protein... 0.07 OrthoFinder
XM_003060721.1 MicpuC2_19354, 19354 Ribosomal protein L7/L12, oligomerisation; Ribosomal... 0.04 OrthoFinder
lcl|BLLF01000770.1_cds_GFH14816.1_9293 HaLaN_10937, GFH14816 Ribosomal protein L7/L12, oligomerisation; Ribosomal... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
CC GO:0009512 cytochrome b6f complex IEP Enrichment
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR008932 Ribosomal_L7/L12_oligo 4 51
IPR013823 Ribosomal_L7/L12_C 60 127
No external refs found!