Sro514_g158160.1 (Contig3991.g30657)

Aliases : Contig3991.g30657

Description : Multisite-specific tRNA:(cytosine-C(5))-methyltransferase trm4b

Gene families : OG_01_0000532 (OrthoFinder) Phylogenetic Tree(s): OG0000532_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro514_g158160.1
Cluster	HCCA: Cluster_41

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00020562.25	tig00020562_g11151.t1	RNA processing.RNA modification.rRNA/tRNA...	0.01	OrthoFinder
Cz01g45120.t1	No alias	Hypothetical protein	0.02	OrthoFinder
Cz01g45130.t1	No alias	SAM-dependent methyltransferase RsmB/NOP2-type [Interproscan].	0.01	OrthoFinder
Dusal.0039s00007.1	33186951	Hypothetical protein	0.01	OrthoFinder
Vocar.0015s0322.1	32898844	SAM-dependent methyltransferase RsmB/NOP2-type [Interproscan].	0.01	OrthoFinder
XM_003060010.1	MicpuC2_59415, 59415	SAM-dependent methyltransferase RsmB/NOP2-type [Interproscan].	0.01	OrthoFinder
XM_003061244.1	MicpuC2_45780, 45780	SAM-dependent methyltransferase RsmB/NOP2-type [Interproscan].	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0008168	methyltransferase activity	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Enrichment
BP	GO:0006457	protein folding	IEP	Enrichment
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Enrichment
BP	GO:0022900	electron transport chain	IEP	Enrichment
MF	GO:0051082	unfolded protein binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001678	MeTrfase_RsmB/NOP2	143	400

External Links

No external refs found!