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  5. Sro4_g003070.1

Sro4_g003070.1 (Contig3815.g29225)


Aliases : Contig3815.g29225

Description : Affinity nitrate transporter 2


Gene families : OG_01_0000133 (OrthoFinder) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro4_g003070.1
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000571.4 tig00000571_g2155.t1 High-affinity nitrate transporter 2.3 OS=Oryza sativa... 0.01 OrthoFinder
Cpa|evm.model.tig00001177.11 tig00001177_g7366.t1 Nutrient uptake.nitrogen assimilation.nitrate uptake... 0.02 OrthoFinder
Cpa|evm.model.tig00001177.16 tig00001177_g7371.t1 Nutrient uptake.nitrogen assimilation.nitrate uptake... 0.01 OrthoFinder
Cre09.g396000 30781439, NRT2.3 Nutrient uptake.nitrogen assimilation.nitrate uptake... 0.01 OrthoFinder
Cre09.g410800 30780896, NRT2.2 Nutrient uptake.nitrogen assimilation.nitrate uptake... 0.02 OrthoFinder
Cre09.g410850 30780328 Nutrient uptake.nitrogen assimilation.nitrate uptake... 0.01 OrthoFinder
Dusal.0123s00024.1 33188391 Hypothetical protein 0.04 OrthoFinder
EOD39011 No alias Putative nitrate transporter [Ensembl]. 0.02 OrthoFinder
PTI_26G01560.1 No alias Major facilitator superfamily [Interproscan]. 0.02 OrthoFinder
Sro1320_g262360.1 Contig4115.g31415 Affinity nitrate transporter 2 0.04 OrthoFinder
SymbC1.scaffold1364.10 1364.10 Hypothetical protein 0.02 OrthoFinder
TP02G06070.1 No alias Major facilitator superfamily [Interproscan]. 0.02 OrthoFinder
TP03G03350.1 No alias Major facilitator superfamily [Interproscan]. 0.01 OrthoFinder
TP07G05080.1 No alias Major facilitator superfamily [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
InterPro domains Description Start Stop
IPR011701 MFS 59 421
No external refs found!