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  5. Sro482_g151740.1

Sro482_g151740.1 (Contig232.g2784)


Aliases : Contig232.g2784

Description : UPF0187 protein


Gene families : OG_01_0000064 (OrthoFinder) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro482_g151740.1
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Cre07.g355300 30775338 Solute transport.channels.VCCN chloride anion channel 0.03 OrthoFinder
Cre16.g662600 30777389 Solute transport.channels.VCCN chloride anion channel 0.03 OrthoFinder
Cre16.g663450 30778050 Solute transport.channels.VCCN chloride anion channel 0.02 OrthoFinder
Dusal.0164s00019.1 33198390 Bestrophin/UPF0187 [Interproscan]. 0.01 OrthoFinder
PTI_10G00030.1 No alias Bestrophin/UPF0187 [Interproscan]. 0.02 OrthoFinder
Vocar.0041s0049.1 32888730 Bestrophin/UPF0187 [Interproscan]. 0.01 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493714.1_4476 KAA8493714 UPF0187 protein 0.03 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493715.1_4477 KAA8493715 UPF0187 protein 0.01 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493716.1_4478 KAA8493716 UPF0187 protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0016540 protein autoprocessing IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR021134 Bestrophin/UPF0187 36 355
No external refs found!