1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro447_g144850.1

Sro447_g144850.1 (Contig3064.g24407)


Aliases : Contig3064.g24407

Description : Nuclear-interacting partner of ALK


Gene families : OG_01_0003420 (OrthoFinder) Phylogenetic Tree(s): OG0003420_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro447_g144850.1
Cluster HCCA: Cluster_309

Target Alias Description ECC score Gene Family Method Actions
Cz17g10130.t1 No alias Zinc finger, C3HC-like [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000077 DNA damage checkpoint signaling IEP Enrichment
CC GO:0000145 exocyst IEP Enrichment
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0031570 DNA integrity checkpoint signaling IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0042770 signal transduction in response to DNA damage IEP Enrichment
BP GO:0044550 secondary metabolite biosynthetic process IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0046937 phytochelatin metabolic process IEP Enrichment
BP GO:0046938 phytochelatin biosynthetic process IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR012935 Znf_C3HC-like 66 154
IPR013909 NIPA/Rsm1 329 421
No external refs found!