Aliases : Contig132.g1492
Description : Alpha type-6
Gene families : OG_01_0003165 (OrthoFinder) Phylogenetic Tree(s): OG0003165_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sro383_g131270.1 | |
Cluster | HCCA: Cluster_146 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00001160.15 | tig00001160_g7349.t1 | Protein degradation.26S proteasome.20S core... | 0.15 | OrthoFinder | |
Cre17.g705400 | 30782060, POA1 | Protein degradation.26S proteasome.20S core... | 0.36 | OrthoFinder | |
Cz18g11130.t1 | No alias | Proteasome, subunit alpha/beta; Proteasome... | 0.03 | OrthoFinder | |
Dusal.0456s00008.1 | 33199044 | Proteasome, subunit alpha/beta; Proteasome... | 0.02 | OrthoFinder | |
EOD10346 | No alias | Proteasome, subunit alpha/beta; Proteasome... | 0.23 | OrthoFinder | |
EOD29147 | No alias | Proteasome, subunit alpha/beta; Proteasome... | 0.23 | OrthoFinder | |
OT_06G00380.1 | No alias | Proteasome alpha-subunit, N-terminal domain; Proteasome,... | 0.11 | OrthoFinder | |
PTI_01G01300.1 | No alias | Proteasome, subunit alpha/beta; Proteasome... | 0.38 | OrthoFinder | |
TP19G00110.1 | No alias | Proteasome, subunit alpha/beta; Proteasome... | 0.33 | OrthoFinder | |
Vocar.0004s0230.1 | 32889720 | Proteasome alpha-subunit, N-terminal domain; Proteasome,... | 0.06 | OrthoFinder | |
XM_002500765.1 | MICPUN_107861, 107861 | Proteasome, subunit alpha/beta; Proteasome... | 0.14 | OrthoFinder | |
XM_003059346.1 | MicpuC2_49613, 49613 | Proteasome, subunit alpha/beta; Proteasome... | 0.11 | OrthoFinder | |
lcl|BLLF01000061.1_cds_GFH06874.1_1351 | HaLaN_01588, GFH06874 | Proteasome subunit alpha type | 0.04 | OrthoFinder | |
lcl|LHPG02000022.1_cds_PRW20644.1_5225 | PRW20644 | Proteasome subunit alpha type-6 | 0.03 | OrthoFinder | |
lcl|VRMN01000010.1_cds_KAA8492128.1_5311 | KAA8492128 | Proteasome subunit alpha type-6 | 0.2 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004175 | endopeptidase activity | IEA | Interproscan |
MF | GO:0004298 | threonine-type endopeptidase activity | IEA | Interproscan |
CC | GO:0005839 | proteasome core complex | IEA | Interproscan |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEA | Interproscan |
CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEA | Interproscan |
BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
CC | GO:0000502 | proteasome complex | IEP | Enrichment |
MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
MF | GO:0005515 | protein binding | IEP | Enrichment |
MF | GO:0005524 | ATP binding | IEP | Enrichment |
BP | GO:0006405 | RNA export from nucleus | IEP | Enrichment |
BP | GO:0006406 | mRNA export from nucleus | IEP | Enrichment |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | Enrichment |
CC | GO:0008541 | proteasome regulatory particle, lid subcomplex | IEP | Enrichment |
BP | GO:0009894 | regulation of catabolic process | IEP | Enrichment |
BP | GO:0015931 | nucleobase-containing compound transport | IEP | Enrichment |
BP | GO:0016043 | cellular component organization | IEP | Enrichment |
BP | GO:0016579 | protein deubiquitination | IEP | Enrichment |
MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
BP | GO:0022607 | cellular component assembly | IEP | Enrichment |
MF | GO:0030234 | enzyme regulator activity | IEP | Enrichment |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Enrichment |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
MF | GO:0036094 | small molecule binding | IEP | Enrichment |
BP | GO:0042176 | regulation of protein catabolic process | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
MF | GO:0043168 | anion binding | IEP | Enrichment |
BP | GO:0043248 | proteasome assembly | IEP | Enrichment |
BP | GO:0043933 | protein-containing complex subunit organization | IEP | Enrichment |
BP | GO:0050657 | nucleic acid transport | IEP | Enrichment |
BP | GO:0050658 | RNA transport | IEP | Enrichment |
BP | GO:0051028 | mRNA transport | IEP | Enrichment |
BP | GO:0051168 | nuclear export | IEP | Enrichment |
BP | GO:0051169 | nuclear transport | IEP | Enrichment |
BP | GO:0051236 | establishment of RNA localization | IEP | Enrichment |
BP | GO:0051246 | regulation of protein metabolic process | IEP | Enrichment |
BP | GO:0065003 | protein-containing complex assembly | IEP | Enrichment |
MF | GO:0070001 | aspartic-type peptidase activity | IEP | Enrichment |
BP | GO:0070646 | protein modification by small protein removal | IEP | Enrichment |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Enrichment |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
MF | GO:0098772 | molecular function regulator | IEP | Enrichment |
CC | GO:0140535 | intracellular protein-containing complex | IEP | Enrichment |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
CC | GO:1905368 | peptidase complex | IEP | Enrichment |
CC | GO:1905369 | endopeptidase complex | IEP | Enrichment |
No external refs found! |