- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Contig2645.g21405
Description : Pathogenesis
Gene families : OG_01_0000975 (OrthoFinder) Phylogenetic Tree(s): OG0000975_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro352_g124290.1 | |
| Cluster | HCCA: Cluster_331 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cz06g31120.t1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| Cz06g31130.t1 | No alias | Pentapeptide repeat [Interproscan]. | 0.03 | OrthoFinder | |
| Dusal.0084s00031.1 | 33201430 | Pentapeptide repeat [Interproscan]. | 0.02 | OrthoFinder | |
| OT_20G00280.1 | No alias | Pentapeptide repeat [Interproscan]. | 0.05 | OrthoFinder | |
| Transcript_contig_54693 | 54693 | Pentapeptide repeat [Interproscan]. | 0.02 | OrthoFinder | |
| XM_002505560.1 | MICPUN_54755, 54755 | Pentapeptide repeat [Interproscan]. | 0.03 | OrthoFinder | |
| XM_003063673.1 | MicpuC2_65966, 65966 | Pentapeptide repeat [Interproscan]. | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000154 | rRNA modification | IEP | Enrichment |
| BP | GO:0001510 | RNA methylation | IEP | Enrichment |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Enrichment |
| BP | GO:0006364 | rRNA processing | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Enrichment |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Enrichment |
| MF | GO:0008990 | rRNA (guanine-N2-)-methyltransferase activity | IEP | Enrichment |
| BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
| MF | GO:0016435 | rRNA (guanine) methyltransferase activity | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | Enrichment |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| MF | GO:0016853 | isomerase activity | IEP | Enrichment |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Enrichment |
| BP | GO:0019725 | cellular homeostasis | IEP | Enrichment |
| BP | GO:0031167 | rRNA methylation | IEP | Enrichment |
| BP | GO:0032259 | methylation | IEP | Enrichment |
| BP | GO:0042592 | homeostatic process | IEP | Enrichment |
| BP | GO:0043414 | macromolecule methylation | IEP | Enrichment |
| BP | GO:0045454 | cell redox homeostasis | IEP | Enrichment |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Enrichment |
| MF | GO:0051213 | dioxygenase activity | IEP | Enrichment |
| BP | GO:0065008 | regulation of biological quality | IEP | Enrichment |
| MF | GO:0071949 | FAD binding | IEP | Enrichment |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001646 | 5peptide_repeat | 106 | 148 |
| No external refs found! |