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  5. Sro348_g123170.1

Sro348_g123170.1 (Contig2346.g19283)


Aliases : Contig2346.g19283

Description : Histone H3


Gene families : OG_01_0000015 (OrthoFinder) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro348_g123170.1
Cluster HCCA: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
Dusal.0093s00026.1 33185350 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Sro69_g038380.1 Contig4677.g34747 Histone H3 0.04 OrthoFinder
Vocar.0122s0001.1 32887588 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32911.1_3817 PRW32911 Histone H3 0.01 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!