Sro341_g121350.1 (Contig3952.g30267)


Aliases : Contig3952.g30267

Description : Sigma factor SigA


Gene families : OG_01_0031608 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro341_g121350.1
Cluster HCCA: Cluster_4


Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006352 DNA-templated transcription, initiation IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006811 ion transport IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
InterPro domains Description Start Stop
IPR007630 RNA_pol_sigma70_r4 417 467
IPR007627 RNA_pol_sigma70_r2 234 302
IPR007624 RNA_pol_sigma70_r3 318 372
No external refs found!