1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro33_g021450.1

Sro33_g021450.1 (Contig2613.g21166)


Aliases : Contig2613.g21166

Description : Clostripain family


Gene families : OG_01_0004277 (OrthoFinder) Phylogenetic Tree(s): OG0004277_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro33_g021450.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Sro1528_g279960.1 Contig526.g6886 Clostripain family 0.03 OrthoFinder
Sro1545_g281290.1 Contig3310.g25931 Peptidase C11, clostripain 0.03 OrthoFinder
Sro1608_g285670.1 Contig1220.g11473 Peptidase C11, clostripain 0.03 OrthoFinder
Sro26_g017540.1 Contig2432.g19925 Peptidase C11, clostripain 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0016540 protein autoprocessing IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR005077 Peptidase_C11 3 268
No external refs found!