Sro336_g120350.1 (Contig4022.g30924)

Aliases : Contig4022.g30924

Description : Inherit from NOG: protein transport

Gene families : OG_01_0001045 (OrthoFinder) Phylogenetic Tree(s): OG0001045_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Sro336_g120350.1
Cluster HCCA: Cluster_302

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000863.31 tig00000863_g4985.t1 Protein TIC 20-v, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre01.g039150 30789697, TIC21 Protein translocation.chloroplast.inner envelope TIC... 0.02 OrthoFinder
Cre04.g225050 30791185 Protein translocation.chloroplast.inner envelope TIC... 0.03 OrthoFinder
PTI_06G04470.1 No alias Chloroplast protein import component Tic20; EF-hand... 0.02 OrthoFinder
Vocar.0049s0018.1 32886553 Chloroplast protein import component Tic20 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01003133.1_cds_GFH26449.1_20926 HaLaN_24600, GFH26449 Chloroplast protein import component Tic20 [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005319 lipid transporter activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006835 dicarboxylic acid transport IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015740 C4-dicarboxylate transport IEP Enrichment
BP GO:0015743 malate transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0120009 intermembrane lipid transfer IEP Enrichment
MF GO:0120013 lipid transfer activity IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 100 160
IPR005691 Tic20 195 358
No external refs found!