Aliases : Contig4472.g33608
Description : Pseudouridine synthase A
Gene families : OG_01_0000916 (OrthoFinder) Phylogenetic Tree(s): OG0000916_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sro3028_g342410.1 | |
Cluster | HCCA: Cluster_130 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000711.19 | tig00000711_g3379.t1 | RNA processing.RNA... | 0.02 | OrthoFinder | |
XM_003061569.1 | MicpuC2_20476, 20476 | Pseudouridine synthase I, TruA, alpha/beta domain [Interproscan]. | 0.02 | OrthoFinder | |
XM_003063552.1 | MicpuC2_5846, 5846 | Pseudouridine synthase I, TruA, alpha/beta domain [Interproscan]. | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEA | Interproscan |
MF | GO:0003723 | RNA binding | IEA | Interproscan |
BP | GO:0009451 | RNA modification | IEA | Interproscan |
MF | GO:0009982 | pseudouridine synthase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004386 | helicase activity | IEP | Enrichment |
MF | GO:0004402 | histone acetyltransferase activity | IEP | Enrichment |
CC | GO:0005667 | transcription regulator complex | IEP | Enrichment |
CC | GO:0005669 | transcription factor TFIID complex | IEP | Enrichment |
BP | GO:0006325 | chromatin organization | IEP | Enrichment |
BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Enrichment |
BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Enrichment |
BP | GO:0006473 | protein acetylation | IEP | Enrichment |
BP | GO:0006475 | internal protein amino acid acetylation | IEP | Enrichment |
MF | GO:0008094 | ATPase, acting on DNA | IEP | Enrichment |
BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
BP | GO:0010035 | response to inorganic substance | IEP | Enrichment |
BP | GO:0010038 | response to metal ion | IEP | Enrichment |
BP | GO:0016569 | covalent chromatin modification | IEP | Enrichment |
BP | GO:0016570 | histone modification | IEP | Enrichment |
BP | GO:0016573 | histone acetylation | IEP | Enrichment |
MF | GO:0016740 | transferase activity | IEP | Enrichment |
MF | GO:0016746 | acyltransferase activity | IEP | Enrichment |
MF | GO:0016755 | aminoacyltransferase activity | IEP | Enrichment |
MF | GO:0016756 | glutathione gamma-glutamylcysteinyltransferase activity | IEP | Enrichment |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
BP | GO:0018205 | peptidyl-lysine modification | IEP | Enrichment |
BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | Enrichment |
BP | GO:0018394 | peptidyl-lysine acetylation | IEP | Enrichment |
BP | GO:0019748 | secondary metabolic process | IEP | Enrichment |
BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Enrichment |
BP | GO:0042221 | response to chemical | IEP | Enrichment |
BP | GO:0043543 | protein acylation | IEP | Enrichment |
BP | GO:0044550 | secondary metabolite biosynthetic process | IEP | Enrichment |
BP | GO:0046937 | phytochelatin metabolic process | IEP | Enrichment |
BP | GO:0046938 | phytochelatin biosynthetic process | IEP | Enrichment |
MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Enrichment |
CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | Enrichment |
CC | GO:0140513 | nuclear protein-containing complex | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR020097 | PsdUridine_synth_TruA_a/b_dom | 246 | 365 |
No external refs found! |