Sro3009_g342040.1 (Contig1048.g10329)


Aliases : Contig1048.g10329

Description : Inherit from COG: Hydrolase


Gene families : OG_01_0003799 (OrthoFinder) Phylogenetic Tree(s): OG0003799_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro3009_g342040.1
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000079.6 tig00000079_g2794.t2 No description available 0.07 OrthoFinder
Cz06g17070.t1 No alias Beta-lactamase superfamily domain [Interproscan]. 0.01 OrthoFinder
Dusal.0303s00013.1 33185549 Beta-lactamase superfamily domain [Interproscan]. 0.01 OrthoFinder
TP23G01250.1 No alias Beta-lactamase superfamily domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_55615 55615 Beta-lactamase superfamily domain [Interproscan]. 0.05 OrthoFinder
Vocar.0001s1225.1 32885035 Beta-lactamase superfamily domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
CC GO:0005886 plasma membrane IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!