Aliases : Contig3579.g27670
Description : Cryptochrome DASH
Gene families : OG_01_0000085 (OrthoFinder) Phylogenetic Tree(s): OG0000085_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sro2726_g335660.1 | |
Cluster | HCCA: Cluster_125 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000391.2 | tig00000391_g24833.t1 | DNA damage response.DNA repair... | 0.04 | OrthoFinder | |
Cpa|evm.model.tig00020965.69 | tig00020965_g16882.t1 | Cryptochrome DASH, chloroplastic/mitochondrial... | 0.06 | OrthoFinder | |
Cpa|evm.model.tig00020965.70 | tig00020965_g16882.t1 | Cryptochrome DASH, chloroplastic/mitochondrial... | 0.07 | OrthoFinder | |
Cpa|evm.model.tig00021012.26 | tig00021012_g17007.t1 | Cryptochrome DASH, chloroplastic/mitochondrial... | 0.02 | OrthoFinder | |
Cpa|evm.model.tig00021579.19 | tig00021579_g22443.t1 | Cryptochrome-1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder | |
Cre01.g030650 | 30789664 | Cryptochrome DASH, chloroplastic/mitochondrial... | 0.01 | OrthoFinder | |
Cre02.g078939 | 30785814 | Cryptochrome DASH, chloroplastic/mitochondrial... | 0.05 | OrthoFinder | |
Cz09g17160.t1 | No alias | DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... | 0.02 | OrthoFinder | |
Dusal.0183s00016.1 | 33202617 | Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan]. | 0.02 | OrthoFinder | |
Dusal.0203s00017.1 | 33199258 | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.01 | OrthoFinder | |
EOD11134 | No alias | Putative Cry-DASH cryptochrome [Ensembl]. | 0.05 | OrthoFinder | |
EOD15451 | No alias | Putative Cry-DASH cryptochrome [Ensembl]. | 0.06 | OrthoFinder | |
EOD19626 | No alias | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.02 | OrthoFinder | |
EOD24687 | No alias | Deoxyribodipyrimidine photolyase/cryptochrome [Ensembl]. | 0.02 | OrthoFinder | |
OT_15G01070.1 | No alias | DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... | 0.03 | OrthoFinder | |
PTI_05G04390.1 | No alias | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.08 | OrthoFinder | |
PTI_08G03200.1 | No alias | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.03 | OrthoFinder | |
Transcript_contig_56266 | 56266 | DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... | 0.03 | OrthoFinder | |
Transcript_contig_7429 | 7429 | Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan]. | 0.01 | OrthoFinder | |
XM_002508739.1 | MICPUN_61974, 61974 | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.05 | OrthoFinder | |
XM_003057723.1 | MicpuC2_16082, 16082 | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.02 | OrthoFinder | |
XM_003061182.1 | MicpuC2_19486, 19486 | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.02 | OrthoFinder | |
XM_003062934.1 | MicpuC2_22169, 22169 | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.01 | OrthoFinder | |
lcl|BLLF01000049.1_cds_GFH06657.1_1134 | HaLaN_01325, GFH06657 | Photolyase/cryptochrome alpha/beta domain-containing protein | 0.02 | OrthoFinder | |
lcl|BLLF01001067.1_cds_GFH16890.1_11367 | HaLaN_13407, GFH16890 | Deoxyribodipyrimidine photo-lyase | 0.02 | OrthoFinder | |
lcl|BLLF01001533.1_cds_GFH19868.1_14345 | HaLaN_16893, GFH19868 | Photolyase/cryptochrome alpha/beta domain-containing protein | 0.03 | OrthoFinder | |
lcl|VRMN01000002.1_cds_KAA8496724.1_453 | KAA8496724 | Deoxyribodipyrimidine photo-lyase | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0003333 | amino acid transmembrane transport | IEP | Enrichment |
MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
MF | GO:0004180 | carboxypeptidase activity | IEP | Enrichment |
MF | GO:0004181 | metallocarboxypeptidase activity | IEP | Enrichment |
MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Enrichment |
MF | GO:0004222 | metalloendopeptidase activity | IEP | Enrichment |
MF | GO:0004527 | exonuclease activity | IEP | Enrichment |
BP | GO:0006813 | potassium ion transport | IEP | Enrichment |
BP | GO:0006865 | amino acid transport | IEP | Enrichment |
MF | GO:0008113 | peptide-methionine (S)-S-oxide reductase activity | IEP | Enrichment |
MF | GO:0008233 | peptidase activity | IEP | Enrichment |
MF | GO:0008235 | metalloexopeptidase activity | IEP | Enrichment |
MF | GO:0008237 | metallopeptidase activity | IEP | Enrichment |
MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Enrichment |
MF | GO:0009055 | electron transfer activity | IEP | Enrichment |
CC | GO:0009521 | photosystem | IEP | Enrichment |
CC | GO:0009523 | photosystem II | IEP | Enrichment |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Enrichment |
BP | GO:0010207 | photosystem II assembly | IEP | Enrichment |
MF | GO:0015298 | solute:cation antiporter activity | IEP | Enrichment |
MF | GO:0015299 | solute:proton antiporter activity | IEP | Enrichment |
BP | GO:0015849 | organic acid transport | IEP | Enrichment |
BP | GO:0015979 | photosynthesis | IEP | Enrichment |
BP | GO:0016043 | cellular component organization | IEP | Enrichment |
MF | GO:0016209 | antioxidant activity | IEP | Enrichment |
MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Enrichment |
MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Enrichment |
BP | GO:0017038 | protein import | IEP | Enrichment |
CC | GO:0019898 | extrinsic component of membrane | IEP | Enrichment |
BP | GO:0022607 | cellular component assembly | IEP | Enrichment |
BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Enrichment |
BP | GO:0043933 | protein-containing complex subunit organization | IEP | Enrichment |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Enrichment |
BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
BP | GO:0065003 | protein-containing complex assembly | IEP | Enrichment |
MF | GO:0070001 | aspartic-type peptidase activity | IEP | Enrichment |
BP | GO:0071702 | organic substance transport | IEP | Enrichment |
BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
MF | GO:0071949 | FAD binding | IEP | Enrichment |
CC | GO:0098796 | membrane protein complex | IEP | Enrichment |
CC | GO:1902494 | catalytic complex | IEP | Enrichment |
BP | GO:1903825 | organic acid transmembrane transport | IEP | Enrichment |
BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | Enrichment |
CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
No external refs found! |