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  5. Sro267_g103430.1

Sro267_g103430.1 (Contig4506.g33805)


Aliases : Contig4506.g33805

Description : Pick C1-like protein 1


Gene families : OG_01_0000125 (OrthoFinder) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro267_g103430.1
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
Sro1491_g277100.1 Contig3009.g24027 Pick C1-like protein 1 0.07 OrthoFinder
Sro163_g073370.1 Contig1793.g15870 Pick C1-like protein 1 0.03 OrthoFinder
Sro2359_g324700.1 Contig777.g8722 Pick C1-like protein 1 0.03 OrthoFinder
Sro2359_g324710.1 Contig777.g8723 Pick C1-like protein 1 0.04 OrthoFinder
Sro2468_g328570.1 Contig2782.g22398 Pick C1-like protein 1 0.03 OrthoFinder
Sro267_g103410.1 Contig4506.g33803 Pick C1-like protein 1 0.04 OrthoFinder
Sro421_g139440.1 Contig1157.g11057 Pick C1-like protein 1 0.03 OrthoFinder
Sro535_g161970.1 Contig1610.g14588 Pick C1-like protein 1 0.03 OrthoFinder
Sro62_g035310.1 Contig2718.g21912 Pick C1-like protein 1 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0016540 protein autoprocessing IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003392 Ptc/Disp 280 891
No external refs found!