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  5. Sro255_g100410.1

Sro255_g100410.1 (Contig2336.g19218)


Aliases : Contig2336.g19218

Description : Ribosylation factor 1


Gene families : OG_01_0000272 (OrthoFinder) Phylogenetic Tree(s): OG0000272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro255_g100410.1
Cluster HCCA: Cluster_270

Target Alias Description ECC score Gene Family Method Actions
Cre12.g486250 30793268, ARL6 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder
Cre12.g535900 30792839, ARL1 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder
Cz02g22080.t1 No alias Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.02 OrthoFinder
Cz13g04090.t1 No alias Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold221.7 221.7 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.02 OrthoFinder
TP01G10350.1 No alias Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.05 OrthoFinder
Transcript_contig_57121 57121 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.01 OrthoFinder
XM_003055098.1 MicpuC2_7976, 7976 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.01 OrthoFinder
XM_003063983.1 MicpuC2_30191, 30191 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003779 actin binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 6 178
No external refs found!