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  5. Cpa|evm.model.tig00000219.40

Cpa|evm.model.tig00000219.40 (tig00000219_g19479.t1)


Aliases : tig00000219_g19479.t1

Description : Elongator complex protein 1 OS=Arabidopsis thaliana


Gene families : OG_01_0003407 (OrthoFinder) Phylogenetic Tree(s): OG0003407_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000219.40
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
Cre08.g372500 30773555 RNA biosynthesis.RNA polymerase II-dependent... 0.01 OrthoFinder
Cz05g10160.t1 No alias Elongator complex protein 1 [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496428.1_157 KAA8496428 Elongator complex protein 1 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0002098 tRNA wobble uridine modification IEA Interproscan
CC GO:0033588 elongator holoenzyme complex IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
CC GO:0008303 caspase complex IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0016255 attachment of GPI anchor to protein IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
BP GO:0018298 protein-chromophore linkage IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
CC GO:0042765 GPI-anchor transamidase complex IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR006849 Elp1 56 151
IPR006849 Elp1 707 868
IPR006849 Elp1 166 428
IPR006849 Elp1 526 703
No external refs found!