1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro253_g099910.1

Sro253_g099910.1 (Contig3900.g29909)


Aliases : Contig3900.g29909

Description : Calreticulin


Gene families : OG_01_0001044 (OrthoFinder) Phylogenetic Tree(s): OG0001044_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro253_g099910.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Cre01.g038400 30788539, CRT2 Protein modification.protein folding and quality... 0.05 OrthoFinder
Cz06g13230.t1 No alias Calreticulin/calnexin [Interproscan]. 0.03 OrthoFinder
Cz10g25020.t1 No alias Calreticulin/calnexin [Interproscan]. 0.01 OrthoFinder
Dusal.0454s00001.1 33185680 Calreticulin/calnexin [Interproscan]. 0.03 OrthoFinder
EOD06331 No alias Calnexin [Ensembl]. 0.03 OrthoFinder
EOD31103 No alias Calreticulin [Ensembl]. 0.03 OrthoFinder
PTI_28G00590.1 No alias Calreticulin/calnexin [Interproscan]. 0.05 OrthoFinder
TP06G06480.1 No alias Calreticulin/calnexin [Interproscan]. 0.05 OrthoFinder
XM_002499849.1 MICPUN_67567, 67567 Calreticulin/calnexin [Interproscan]. 0.01 OrthoFinder
XM_003055212.1 MicpuC2_2468, 2468 Calreticulin/calnexin [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001710.1_cds_GFH20852.1_15329 HaLaN_18045, GFH20852 Calreticulin 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0005783 endoplasmic reticulum IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004017 adenylate kinase activity IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
MF GO:0004623 phospholipase A2 activity IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
InterPro domains Description Start Stop
IPR001580 Calret/calnex 265 340
IPR001580 Calret/calnex 24 262
No external refs found!