Sro2362_g324860.1 (Contig1769.g15640)

Aliases : Contig1769.g15640

Description : Thermosome subunit beta (Fragment)

Gene families : OG_01_0003436 (OrthoFinder) Phylogenetic Tree(s): OG0003436_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro2362_g324860.1
Cluster	HCCA: Cluster_74

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00020903.30	tig00020903_g15096.t1	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.03	OrthoFinder
Cre09.g416750	30781340, CCT2	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.15	OrthoFinder
Cz12g27040.t1	No alias	Chaperonin Cpn60/TCP-1 family [Interproscan].	0.09	OrthoFinder
Dusal.0437s00014.1	33198276	Chaperonin Cpn60/TCP-1 family [Interproscan].	0.04	OrthoFinder
EOD03984	No alias	Chaperonin Cpn60/TCP-1 family [Interproscan].	0.18	OrthoFinder
EOD34861	No alias	Chaperonin Cpn60/TCP-1 family [Interproscan].	0.14	OrthoFinder
OT_08G02610.1	No alias	Chaperonin Cpn60/TCP-1 family [Interproscan].	0.08	OrthoFinder
TP04G07770.1	No alias	Chaperonin Cpn60/TCP-1 family [Interproscan].	0.04	OrthoFinder
Vocar.0011s0268.1	32895339	Chaperonin Cpn60/TCP-1 family [Interproscan].	0.09	OrthoFinder
XM_002508232.1	MICPUN_108805, 108805	Chaperonin Cpn60/TCP-1 family [Interproscan].	0.1	OrthoFinder
XM_003058918.1	MicpuC2_45559, 45559	Chaperonin Cpn60/TCP-1 family [Interproscan].	0.05	OrthoFinder
lcl\|BLLF01000191.1_cds_GFH08872.1_3349	HaLaN_03911, GFH08872	T-complex 1 subunit beta	0.07	OrthoFinder
lcl\|LHPG02000006.1_cds_PRW57878.1_8658	PRW57878	T-complex 1 subunit beta	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000808	origin recognition complex	IEP	Enrichment
MF	GO:0003924	GTPase activity	IEP	Enrichment
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Enrichment
CC	GO:0005634	nucleus	IEP	Enrichment
BP	GO:0006260	DNA replication	IEP	Enrichment
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Enrichment
BP	GO:0043933	protein-containing complex subunit organization	IEP	Enrichment
BP	GO:0046907	intracellular transport	IEP	Enrichment
BP	GO:0051641	cellular localization	IEP	Enrichment
BP	GO:0051649	establishment of localization in cell	IEP	Enrichment
BP	GO:0065003	protein-containing complex assembly	IEP	Enrichment
MF	GO:0070001	aspartic-type peptidase activity	IEP	Enrichment
BP	GO:0070070	proton-transporting V-type ATPase complex assembly	IEP	Enrichment
BP	GO:0070071	proton-transporting two-sector ATPase complex assembly	IEP	Enrichment
BP	GO:0070072	vacuolar proton-transporting V-type ATPase complex assembly	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/TCP-1	29	532

External Links

No external refs found!