Sro234_g094550.1 (Contig3223.g25502)

Aliases : Contig3223.g25502

Description : Shock factor protein 4

Gene families : OG_01_0000044 (OrthoFinder) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Sro234_g094550.1
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Sro1120_g243320.1 Contig896.g9502 Stress transcription factor A 0.03 OrthoFinder
Sro1120_g243330.1 Contig896.g9503 Stress transcription factor A-3 0.03 OrthoFinder
Sro450_g145560.1 Contig271.g3481 Heat stress transcription factor 0.04 OrthoFinder
TP08G03170.1 No alias Heat shock factor (HSF)-type, DNA-binding [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 27 125
No external refs found!