Sro2049_g312540.1 (Contig754.g8570)

Aliases : Contig754.g8570

Description : Histone H3

Gene families : OG_01_0000015 (OrthoFinder) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro2049_g312540.1
Cluster	HCCA: Cluster_113

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000836.6	tig00000836_g4689.t1	Histone H3-like 2 OS=Arabidopsis thaliana	0.02	OrthoFinder
Cz19g02230.t1	No alias	Histone H2A/H2B/H3 [Interproscan].	0.02	OrthoFinder
OT_01G03920.1	No alias	Histone H2A/H2B/H3 [Interproscan].	0.01	OrthoFinder
XM_002502558.1	MICPUN_58772, 58772	Histone H3	0.05	OrthoFinder
XM_003056465.1	MicpuC2_64879, 64879	Histone H3	0.01	OrthoFinder
lcl\|VRMN01000003.1_cds_KAA8495290.1_1288	KAA8495290	Histone H3	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Enrichment
CC	GO:0005634	nucleus	IEP	Enrichment
BP	GO:0006260	DNA replication	IEP	Enrichment
MF	GO:0008146	sulfotransferase activity	IEP	Enrichment
MF	GO:0016779	nucleotidyltransferase activity	IEP	Enrichment
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	Enrichment
BP	GO:0022607	cellular component assembly	IEP	Enrichment
MF	GO:0034061	DNA polymerase activity	IEP	Enrichment
CC	GO:0043227	membrane-bounded organelle	IEP	Enrichment
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Enrichment
BP	GO:0043933	protein-containing complex subunit organization	IEP	Enrichment
BP	GO:0051259	protein complex oligomerization	IEP	Enrichment
BP	GO:0051260	protein homooligomerization	IEP	Enrichment
BP	GO:0065003	protein-containing complex assembly	IEP	Enrichment
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR007125	Histone_H2A/H2B/H3	1	132

External Links

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