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  5. Sro1_g000690.1

Sro1_g000690.1 (Contig3007.g23984)


Aliases : Contig3007.g23984

Description : DEAD-box ATP-dependent RNA helicase


Gene families : OG_01_0003333 (OrthoFinder) Phylogenetic Tree(s): OG0003333_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1_g000690.1
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
Dusal.0239s00015.1 33192054 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
TP01G06080.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.04 OrthoFinder
XM_003054896.1 MicpuC2_50146, 50146 DEAD/DEAH box helicase 0.01 OrthoFinder
lcl|BLLF01000997.1_cds_GFH16435.1_10912 HaLaN_12856, GFH16435 DEAD/DEAH box helicase domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 177 396
IPR001650 Helicase_C 553 614
No external refs found!