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  5. Sro197_g083720.1

Sro197_g083720.1 (Contig3509.g27177)


Aliases : Contig3509.g27177

Description : Deoxy-D-xylulose-5-phosphate synthase


Gene families : OG_01_0001797 (OrthoFinder) Phylogenetic Tree(s): OG0001797_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Sro197_g083720.1
Cluster HCCA: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
Cre07.g356350 30774985, DXS1 Secondary metabolism.terpenoids.methylerythritol... 0.04 OrthoFinder
EOD35929 No alias Deoxyxylulose-5-phosphate synthase; Transketolase-like,... 0.08 OrthoFinder
OT_02G01590.1 No alias Transketolase, C-terminal domain;... 0.05 OrthoFinder
PTI_00G03430.1 No alias Transketolase, C-terminal domain; Transketolase-like,... 0.11 OrthoFinder
TP07G02240.1 No alias Transketolase, C-terminal domain; Transketolase-like,... 0.03 OrthoFinder
lcl|BLLF01002335.1_cds_GFH23688.1_18165 HaLaN_21341, GFH23688 Transketolase_1 domain-containing protein 0.03 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496827.1_556 KAA8496827 1-deoxy-D-xylulose-5-phosphate synthase 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEA Interproscan
BP GO:0016114 terpenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006788 heme oxidation IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP Enrichment
MF GO:0008883 glutamyl-tRNA reductase activity IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016849 phosphorus-oxygen lyase activity IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0046422 violaxanthin de-epoxidase activity IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR033248 Transketolase_C 590 710
IPR005475 Transketolase-like_Pyr-bd 379 537
IPR005477 Dxylulose-5-P_synthase 55 340
No external refs found!