Sro196_g083590.1 (Contig3206.g25355)


Aliases : Contig3206.g25355

Description : 10 kDa chaperonin


Gene families : OG_01_0001673 (OrthoFinder) Phylogenetic Tree(s): OG0001673_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro196_g083590.1
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Cre08.g358562 30773999, CPN20 External stimuli response.temperature.Hsp... 0.03 OrthoFinder
Cre12.g505850 30793371, CPN23 External stimuli response.temperature.Hsp... 0.04 OrthoFinder
Cz03g10020.t1 No alias GroES chaperonin family [Interproscan]. 0.02 OrthoFinder
Dusal.0244s00009.1 33186503 GroES chaperonin family [Interproscan]. 0.01 OrthoFinder
EOD14157 No alias Chaperonin 10 [Ensembl]. 0.02 OrthoFinder
OT_14G01290.1 No alias GroES chaperonin family [Interproscan]. 0.05 OrthoFinder
TP14G02880.1 No alias GroES chaperonin family [Interproscan]. 0.06 OrthoFinder
Vocar.0001s0361.1 32886146 GroES chaperonin family [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001460.1_cds_GFH19416.1_13893 HaLaN_16361, GFH19416 GroES chaperonin family [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44534.1_2341 PRW44534 20 kDa chloroplastic 0.03 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495702.1_1700 KAA8495702 20 kDa chaperonin, chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR020818 Chaperonin_GroES 46 137
IPR020818 Chaperonin_GroES 152 241
No external refs found!