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  5. Sro1937_g306420.1

Sro1937_g306420.1 (Contig3219.g25441)


Aliases : Contig3219.g25441

Description : COBW domain-containing protein 1


Gene families : OG_01_0000111 (OrthoFinder) Phylogenetic Tree(s): OG0000111_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1937_g306420.1
Cluster HCCA: Cluster_309

Target Alias Description ECC score Gene Family Method Actions
Dusal.1170s00001.1 33187782 Cobalamin (vitamin B12) biosynthesis CobW-like,... 0.01 OrthoFinder
EOD15846 No alias CobW/HypB/UreG, nucleotide-binding domain; Cobalamin... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000702 oxidized base lesion DNA N-glycosylase activity IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
MF GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016972 thiol oxidase activity IEP Enrichment
MF GO:0019104 DNA N-glycosylase activity IEP Enrichment
InterPro domains Description Start Stop
IPR011629 Cbl_biosynth_CobW-like_C 313 390
IPR003495 CobW/HypB/UreG_dom 40 238
No external refs found!