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  5. Sro1762_g295970.1

Sro1762_g295970.1 (Contig3380.g26451)


Aliases : Contig3380.g26451

Description : ECF subfamily RNA polymerase sigma-24 subunit


Gene families : OG_01_0012516 (OrthoFinder) Phylogenetic Tree(s): OG0012516_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1762_g295970.1
Cluster HCCA: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
Sro1044_g234890.1 Contig685.g7975 Hypothetical protein 0.04 OrthoFinder
Sro472_g149980.1 Contig4323.g32613 ECF subfamily RNA polymerase sigma-24 subunit 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
MF GO:0019825 oxygen binding IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!