Sro175_g076960.1 (Contig1856.g16212)


Aliases : Contig1856.g16212

Description : Prolycopene isomerase, chloroplastic


Gene families : OG_01_0000207 (OrthoFinder) Phylogenetic Tree(s): OG0000207_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro175_g076960.1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001258.10 tig00001258_g7832.t1 No description available 0.01 OrthoFinder
Cre16.g651923 30776797 Secondary metabolism.terpenoids.terpenoid... 0.01 OrthoFinder
Cz14g22040.t1 No alias Amine oxidase [Interproscan]. 0.01 OrthoFinder
EOD20723 No alias Hypothetical protein [Ensembl]. 0.02 OrthoFinder
Transcript_contig_78738 78738 Hypothetical protein 0.01 OrthoFinder
Vocar.0018s0001.1 32898723 Amine oxidase [Interproscan]. 0.02 OrthoFinder
XM_003054741.1 MicpuC2_30566, 30566 Amine oxidase [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 69 577
No external refs found!