Sro171_g075730.1 (Contig113.g1282)


Aliases : Contig113.g1282

Description : Receptor subunit 1


Gene families : OG_01_0000795 (OrthoFinder) Phylogenetic Tree(s): OG0000795_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro171_g075730.1
Cluster HCCA: Cluster_258

Target Alias Description ECC score Gene Family Method Actions
Sro1333_g263630.1 Contig3364.g26362 Receptor subunit 1 0.02 OrthoFinder
Sro1777_g296940.1 Contig3318.g26035 Receptor ionotropic, NMDA 1 0.03 OrthoFinder
Sro1834_g300540.1 Contig890.g9473 Receptor subunit 1 0.03 OrthoFinder
Sro206_g086490.1 Contig4750.g35186 Ionotropic glutamate receptor [Interproscan]. 0.04 OrthoFinder
Sro468_g149240.1 Contig3973.g30518 Receptor subunit 1 0.04 OrthoFinder
Sro468_g149250.1 Contig3973.g30519 Hypothetical protein 0.05 OrthoFinder
Sro935_g222040.1 Contig1126.g10784 Receptor subunit 1 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016972 thiol oxidase activity IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt 202 508
No external refs found!