1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00000217.22

Cpa|evm.model.tig00000217.22 (tig00000217_g19155.t1)


Aliases : tig00000217_g19155.t1

Description : RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).core components.MOS4 component


Gene families : OG_01_0003885 (OrthoFinder) Phylogenetic Tree(s): OG0003885_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000217.22
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Cre17.g697350 30782323 RNA processing.RNA splicing.spliceosome-associated... 0.02 OrthoFinder
Cz03g32140.t1 No alias Pre-mRNA-splicing factor SPF27 [Interproscan]. 0.03 OrthoFinder
Dusal.0018s00018.1 33187059 Pre-mRNA-splicing factor SPF27 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Enrichment
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006402 mRNA catabolic process IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006621 protein retention in ER lumen IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
BP GO:0010629 negative regulation of gene expression IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0032507 maintenance of protein location in cell IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0045185 maintenance of protein location IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0051651 maintenance of location in cell IEP Enrichment
BP GO:0072595 maintenance of protein localization in organelle IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
BP GO:0110154 RNA decapping IEP Enrichment
BP GO:0110156 methylguanosine-cap decapping IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR008409 SPF27 12 205
No external refs found!