Sro15_g011060.1 (Contig791.g8832)

Aliases : Contig791.g8832

Description : Transcription elongation factor A protein 2

Gene families : OG_01_0000595 (OrthoFinder) Phylogenetic Tree(s): OG0000595_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Sro15_g011060.1
Cluster HCCA: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
Dusal.0629s00004.1 33201004 Zinc finger, TFIIS-type; Transcription elongation factor... 0.01 OrthoFinder
TP10G02040.1 No alias Transcription elongation factor S-II, central domain;... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
CC GO:0030008 TRAPP complex IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR017923 TFIIS_N 33 79
IPR003618 TFIIS_cen_dom 158 237
IPR001222 Znf_TFIIS 270 308
No external refs found!